Class FileReader

• Defined in File FileReader.h

Class Documentation

class SmartPeak::FileReader

Public Functions

FileReader() = delete

~FileReader() = delete

FileReader(const FileReader&) = delete

FileReader &operator=(const FileReader&) = delete

FileReader(FileReader&&) = delete

FileReader &operator=(FileReader&&) = delete

Public Static Functions

static void parseOpenMSParams(const std::string &filename, ParameterSet &parameters)

Parse parameters from csv file.

Parameters

• filename – [in] Input csv file

• parameters – [out] Output of the form { { “ConvertTSVToTraML”, { { {“name”, “-in”}, {“value”, “IsolateA1.csv”} }, { {“name”, “-out”}, {“value”, “IsolateA1.traML”} } } }, { “MRMMapper”, { { {“name”, “-in”}, {“value”, “IsolateA1.mzML”} }, { {“name”, “-tr”}, {“value”, “IsolateA1.traML”} }, { {“name”, “-out”}, {“value”, “IsolateA1_features.mzML”} }, { {“name”, “-precursor_tolerance”}, {“value”, “0.5”} }, { {“name”, “-product_tolerance”}, {“value”, “0.5”} }, { {“name”, “-no-strict”}, {“value”, “”} } } } }