Class Filenames

Class Documentation

class SmartPeak::Filenames

Public Functions

void clear()

Public Members

std::string sequence_csv_i
std::string parameters_csv_i
std::string workflow_csv_i
std::string traML_csv_i
std::string featureFilterComponents_csv_i
std::string featureFilterComponentGroups_csv_i
std::string featureQCComponents_csv_i
std::string featureQCComponentGroups_csv_i
std::string featureRSDFilterComponents_csv_i
std::string featureRSDFilterComponentGroups_csv_i
std::string featureRSDQCComponents_csv_i
std::string featureRSDQCComponentGroups_csv_i
std::string featureBackgroundFilterComponents_csv_i
std::string featureBackgroundFilterComponentGroups_csv_i
std::string featureBackgroundQCComponents_csv_i
std::string featureBackgroundQCComponentGroups_csv_i
std::string featureRSDEstimationComponents_csv_i
std::string featureRSDEstimationComponentGroups_csv_i
std::string featureBackgroundEstimationComponents_csv_i
std::string featureBackgroundEstimationComponentGroups_csv_i
std::string quantitationMethods_csv_i
std::string standardsConcentrations_csv_i
std::string referenceData_csv_i
std::string mzML_i
std::string mzTab_i
std::string mzTab_o
std::string featureXML_o
std::string featureXMLSampleGroup_o
std::string featureXML_i
std::string featureXMLSampleGroup_i
std::string featureFilterComponents_csv_o
std::string featureFilterComponentGroups_csv_o
std::string featureQCComponents_csv_o
std::string featureQCComponentGroups_csv_o
std::string featureRSDFilterComponents_csv_o
std::string featureRSDFilterComponentGroups_csv_o
std::string featureRSDQCComponents_csv_o
std::string featureRSDQCComponentGroups_csv_o
std::string featureBackgroundFilterComponents_csv_o
std::string featureBackgroundFilterComponentGroups_csv_o
std::string featureBackgroundQCComponents_csv_o
std::string featureBackgroundQCComponentGroups_csv_o
std::string featureRSDEstimationComponents_csv_o
std::string featureRSDEstimationComponentGroups_csv_o
std::string featureBackgroundEstimationComponents_csv_o
std::string featureBackgroundEstimationComponentGroups_csv_o
std::string quantitationMethods_csv_o
std::string componentsToConcentrations_csv_o
std::string pivotTable_csv_o
std::string featureDB_csv_o
std::string mzml_input_path
std::string features_input_path
std::string output_path

Public Static Functions

static Filenames getDefaultStaticFilenames(const std::string &dir)
static Filenames getDefaultDynamicFilenames(const std::string &mzml_input_path, const std::string &features_input_path, const std::string &output_path, const std::string &input_mzML_filename, const std::string &input_inj_name, const std::string &output_inj_name, const std::string &input_sample_name, const std::string &output_sample_name)
static void updateDefaultDynamicFilenames(const std::string &mzml_input_path, const std::string &features_input_path, const std::string &output_path, Filenames &filenames)